PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_64018.2
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family bHLH
Protein Properties Length: 159aa    MW: 17403.9 Da    PI: 5.1641
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_64018.2genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH13.60.000123322255
                  HHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
           HLH 22 eLrellPkaskapskKlsKaeiLekAveYIksLq 55
                   L++l+P +    +k   Ka++L + ++Y++sLq
  MLOC_64018.2  3 HLQDLVPGC----NKITGKAMMLDEIINYVQSLQ 32
                  79******9....899*****************9 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:4.10.280.101.0E-10148IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
PROSITE profilePS508889.87131IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474592.22E-9247IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000832.81E-4436No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 159 aa     Download sequence    Send to blast
MKHLQDLVPG CNKITGKAMM LDEIINYVQS LQRQVEFLSM KLSAVSPELN CDLDLQDILC  60
PQDARSAFPG YGQRLGNVHP NGSMFRASQP GLSRPELYGN GIIIPDPASV HHMARTAQLP  120
AFPQRSIVWD EELRGIGPVA FPADAGTSSL ENSDSMKVE
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003558437.12e-91PREDICTED: transcription factor bHLH74-like
SwissprotQ9C6708e-24BH076_ARATH; Transcription factor bHLH76
TrEMBLM0XXT61e-116M0XXT6_HORVD; Uncharacterized protein
TrEMBLM0XXT51e-116M0XXT5_HORVD; Uncharacterized protein
STRINGMLOC_64018.11e-115(Hordeum vulgare)
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G26260.32e-25cryptochrome-interacting basic-helix-loop-helix 5